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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2096714_2096847_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2096714 - 2096847

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

ATTTTCTGCATA

Flanking Amino Acid:

WSLVEASVKTGPNTRSLQNL

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

71.6

0.49

64.8

41.4

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

0.09

1.9

70.02

36.5

Associated Gene:

Gene:

RUSC1

Ensembl Gene ID:

ENSAPLG00000021575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018685

2093573 - 2100409

6837