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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2098445_2098906_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2098445 - 2098906

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TGCTAGCTCACG

Flanking Amino Acid:

CGPNTVSARSRRPSSWLSPS

Intron Amino Acid Position:

1033

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

71.3

37.2

Major BPS

0.28

1.1

63.1

35.8

Major PPT

74.5

0.55

71.9

Minor 5ss

-2.1

3.3

42.6

44.4

Minor BPS

36.5

-1.2

2.6

45.52

46.4

Associated Gene:

Gene:

RUSC1

Ensembl Gene ID:

ENSAPLG00000021575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018685

2093573 - 2100409

6837