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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2105500_2106212_R


Intron Information:

Intron Rank:
24

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2105500 - 2106212

Intron Length:
713

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAAGTCTT

5'SS Class:
strong_major

3'SS Sequence:
CTTTTCCTGTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTAAA

U12 Branch Point Sequence:
TGGTATTTAAAC

Flanking Amino Acid:
VPDNYKRNGGRSSWKTDRSK

Intron Amino Acid Position:
2849

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88
0.89
0.9
82.1
37.7

Major BPS
81.6
0.78
0.8
82
24.9

Major PPT
81
0.7
0.9
81.1
30.9

Minor 5ss
40.6
-1
3.1
60.2
44.1

Minor BPS
57.6
0.22
1.6
65.44
39.8

Associated Gene:

Gene:
ASH1L

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2102393 - 2152350
49958

2104173 - 2152350
48178