Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_2108939_2110718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2108939 - 2110718

Intron Length:

1780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGCCTATTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TTGTGCCTATTG

Flanking Amino Acid:

LLRDDLLLRQGDCVYLMRDS

Intron Amino Acid Position:

2676

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

68.5

0.42

61.6

43.6

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

44.4

-0.5

2.3

55.54

46.1

Associated Gene:

Gene:

ASH1L

Ensembl Gene ID:

ENSAPLG00000013084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019004

2102393 - 2152350

49958

ENSAPLT00000013648

2104173 - 2152350

48178