Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_2111835_2112304_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2111835 - 2112304

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTGTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACACAT

U12 Branch Point Sequence:

ACATACAAAGGT

Flanking Amino Acid:

DMLKVFRNAEKYYGRKSPTG

Intron Amino Acid Position:

2534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

61.1

0.28

29.8

Major PPT

85.2

0.79

0.9

84.6

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

35.2

-1

2.1

49.04

43.7

Associated Gene:

Gene:

ASH1L

Ensembl Gene ID:

ENSAPLG00000013084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019004

2102393 - 2152350

49958

ENSAPLT00000013648

2104173 - 2152350

48178