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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2113205_2113940_R


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2113205 - 2113940

Intron Length:
736

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAAGGCCA

5'SS Class:
strong_major

3'SS Sequence:
TGCCCTCTTTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGTAAAT

U12 Branch Point Sequence:
TTTGGCATAATT

Flanking Amino Acid:
ICRDDGNIKSDVFMTQFSAL

Intron Amino Acid Position:
2418

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.2
0.71
1
65
40.6

Major BPS
58.4
0.21
1.2
65
38.7

Major PPT
79.9
0.67
0.8
76.7
32

Minor 5ss
31.2
-2.2
3.2
36.8
41.4

Minor BPS
54.8
0.23
2.1
80.51
41.8

Associated Gene:

Gene:
ASH1L

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2102393 - 2152350
49958

2104173 - 2152350
48178