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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2130989_2135262_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2130989 - 2135262

Intron Length:
4274

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
CAG|GCAAGTAAT

5'SS Class:
strong_major

3'SS Sequence:
GTTTGTGTTTCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTCTAT

U12 Branch Point Sequence:
ATATTTCTATTT

Flanking Amino Acid:
RSTSESTSSTVIGVPTRGTR

Intron Amino Acid Position:
1759

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
99.3
1.16
0.7
90.9
28.7

Major BPS
73.8
0.59
1.3
72.8
43

Major PPT
80.3
0.68
1
76.9
42.1

Minor 5ss
27.1
-2.6
3.8
41.5
45.1

Minor BPS
47.7
-0
1.8
67.16
38.1

Associated Gene:

Gene:
ASH1L

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2102393 - 2152350
49958

2104173 - 2152350
48178