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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2135365_2140209_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2135365 - 2140209

Intron Length:
4845

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGGAG

5'SS Class:
strong_major

3'SS Sequence:
ATCTGCTTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CCCTGAT

U12 Branch Point Sequence:
TCTTCCCTGATC

Flanking Amino Acid:
SIEKALQPLSGTLPTQDKPS

Intron Amino Acid Position:
1725

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.5
0.91
0.9
73
38.2

Major BPS
66.4
0.41
1.1
56.9
40.5

Major PPT
80.7
0.69
0.9
77.2
36.5

Minor 5ss
28.6
-2.5
3.5
36.8
47.7

Minor BPS
64.6
0.44
1.7
74.36
36.8

Associated Gene:

Gene:
ASH1L

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2102393 - 2152350
49958

2104173 - 2152350
48178