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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2176887_2177114_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2176887 - 2177114

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAACAT

U12 Branch Point Sequence:

TCCACCTGAAAA

Flanking Amino Acid:

LRGISKEGHTSSCPGKQPTS

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

76.1

Major BPS

54.4

0.11

61.4

34.3

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

38.8

-1.3

2.8

48.7

47.1

Minor BPS

54.3

0.13

1.7

62.4

43.3

Associated Gene:

Gene:

MSTO1

Ensembl Gene ID:

ENSAPLG00000014094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014674

2173376 - 2178004

4629