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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2177419_2177672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2177419 - 2177672

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGTGT

5'SS Class:

major

3'SS Sequence:

TCTTTCCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TGTATTTAAACA

Flanking Amino Acid:

PGQTYQLFCSSC*

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

68.4

38.9

Major BPS

81.6

0.78

0.8

24.9

Major PPT

86.8

0.83

0.7

81.5

23.5

Minor 5ss

33.1

-1.9

3.3

47.4

Minor BPS

56.4

0.2

1.7

68.05

38.5

Associated Gene:

Gene:

MSTO1

Ensembl Gene ID:

ENSAPLG00000014094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014674

2173376 - 2178004

4629