Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_2192244_2192865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2192244 - 2192865

Intron Length:

622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

TCTCTCCACACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGCAT

U12 Branch Point Sequence:

TTGCCTTGCATT

Flanking Amino Acid:

MNRAPDNIIRYYKKTKQLPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

75.1

35.1

Major BPS

62.7

0.32

1.4

39.9

Major PPT

74.4

0.55

0.8

30.5

Minor 5ss

35.6

-1.6

3.3

45.6

43.6

Minor BPS

48.5

-0

1.9

69.84

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014790

2181768 - 2193285

11518