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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2195249_2197239_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2195249 - 2197239

Intron Length:

1991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGATAA

5'SS Class:

strong_major

3'SS Sequence:

TGGTCTCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTATATTT

Flanking Amino Acid:

RPNFNTPQALRFEEPLANLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.9

32.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

64.1

0.32

1.1

59.3

Minor 5ss

35.9

-1.6

3.3

46.4

48.9

Minor BPS

49.5

0.04

1.8

71.56

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023622

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042941

2193624 - 2197661

4038