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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2236802_2237783_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2236802 - 2237783

Intron Length:

982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTCCTTTCCT

Flanking Amino Acid:

NGVGSLPGNHDHQAKKMKTS

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.9

31.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

82.8

0.74

0.7

76.9

31.7

Minor 5ss

27.7

-2.6

29.3

Minor BPS

51.2

0.12

3.7

92.33

36.7

Associated Gene:

Gene:

KHDC4

Ensembl Gene ID:

ENSAPLG00000014761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024214

2236602 - 2247182

10581

ENSAPLT00000015406

2236602 - 2246871

10270