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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2237876_2239222_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2237876 - 2239222

Intron Length:

1347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTTAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

AATTGTTTAAAT

Flanking Amino Acid:

SSSGKERERDRQLMPPPAFP

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

0.75

78.6

Major PPT

66.8

0.38

63.5

41.5

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

59.9

0.39

1.8

76.83

39.5

Associated Gene:

Gene:

KHDC4

Ensembl Gene ID:

ENSAPLG00000014761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024214

2236602 - 2247182

10581

ENSAPLT00000015406

2236602 - 2246871

10270