Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_2240435_2240931_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2240435 - 2240931

Intron Length:

497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGCCA

5'SS Class:

major

3'SS Sequence:

TTCGGCATGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

TTTTTTCCAACT

Flanking Amino Acid:

QVQPPASTGQSPLSAPFLPA

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.1

56.2

42.6

Major BPS

0.72

80.3

31.7

Major PPT

62.9

0.29

1.1

54.8

44.7

Minor 5ss

-2.3

3.4

40.2

45.3

Minor BPS

59.8

0.39

1.9

84.49

Associated Gene:

Gene:

KHDC4

Ensembl Gene ID:

ENSAPLG00000014761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015406

2236602 - 2246871

10270

ENSAPLT00000024214

2236602 - 2247182

10581