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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2241186_2241390_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2241186 - 2241390

Intron Length:

205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

TCTCTCTCACCA

Flanking Amino Acid:

NQITTAVPLAGFAQPAAINS

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

78.6

35.9

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

76.9

0.61

0.8

70.5

34.9

Minor 5ss

41.6

-0.9

3.6

64.1

47.4

Minor BPS

49.8

-0

1.8

64.43

42.1

Associated Gene:

Gene:

KHDC4

Ensembl Gene ID:

ENSAPLG00000014761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024214

2236602 - 2247182

10581

ENSAPLT00000015406

2236602 - 2246871

10270