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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2243076_2243421_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2243076 - 2243421

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTAAT

5'SS Class:

major

3'SS Sequence:

GTTACATTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TAAGCCTTTACT

Flanking Amino Acid:

VGQKPPFQSGMHYVQDKLFV

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.1

77.9

38.6

Major BPS

71.2

0.53

70.3

31.9

Major PPT

77.1

0.61

0.9

69.3

40.7

Minor 5ss

35.6

-1.6

3.1

42.1

44.8

Minor BPS

0.52

1.8

78.04

43.9

Associated Gene:

Gene:

KHDC4

Ensembl Gene ID:

ENSAPLG00000014761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024214

2236602 - 2247182

10581

ENSAPLT00000015406

2236602 - 2246871

10270