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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2244171_2244768_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2244171 - 2244768

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTTTGTATT

5'SS Class:

major

3'SS Sequence:

ATTTCCTTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

GAGTGTTTGACA

Flanking Amino Acid:

TVEEKAKVGPGDRPLYLHVQ

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.2

75.6

Major BPS

81.6

0.78

0.8

24.9

Major PPT

77.6

0.62

0.8

70.3

35.7

Minor 5ss

43.7

-0.7

2.5

53.2

43.6

Minor BPS

51.1

0.03

1.8

59.4

40.7

Associated Gene:

Gene:

KHDC4

Ensembl Gene ID:

ENSAPLG00000014761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024214

2236602 - 2247182

10581

ENSAPLT00000015406

2236602 - 2246871

10270