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Intron Name: Anas_platyrhynchos_platyrhynchos_26_2245327_2246435_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2245327 - 2246435

Intron Length:

1109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCTTTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TTGTCTTTGAAG

Flanking Amino Acid:

LKPAPSTADKLQALGKGPAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

76.9

0.67

1.2

31.9

Major PPT

71.7

0.49

1.1

71.7

38.4

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

63.8

0.29

1.5

67.24

40.8

Associated Gene:

Gene:

KHDC4

Ensembl Gene ID:

ENSAPLG00000014761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015406

2236602 - 2246871

10270

ENSAPLT00000024214

2236602 - 2247182

10581