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Intron Name: Anas_platyrhynchos_platyrhynchos_26_288037_288344_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

288037 - 288344

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

GTTAAAGCAAAT

Flanking Amino Acid:

MRDMAQLRLQLEVSQLEGSL

Intron Amino Acid Position:

804

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.5

35.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

0.59

72.6

42.4

Minor 5ss

29.3

-2.4

3.5

40.3

46.1

Minor BPS

36.6

-0.9

2.3

58.03

43.6

Associated Gene:

Gene:

SMG5

Ensembl Gene ID:

ENSAPLG00000010263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010739

286118 - 305367

19250