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Intron Name: Anas_platyrhynchos_platyrhynchos_26_290034_290717_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

290034 - 290717

Intron Length:

684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAACT

5'SS Class:

major

3'SS Sequence:

ATGTGCCTTAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TGTGCCTTAGAG

Flanking Amino Acid:

NTDLIIMCAQHFSSVSASVV

Intron Amino Acid Position:

648

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

74.2

36.1

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

51.9

0.04

1.7

58.1

42.7

Minor 5ss

29.3

-2.4

3.2

40.6

45.3

Minor BPS

53.2

-0

1.9

61.64

45.7

Associated Gene:

Gene:

SMG5

Ensembl Gene ID:

ENSAPLG00000010263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010739

286118 - 305367

19250