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Intron Name: Anas_platyrhynchos_platyrhynchos_26_292946_293014_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

292946 - 293014

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCCTTAAAA

5'SS Class:

major

3'SS Sequence:

CTCTAAAACTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

ATCTCTAAAACT

Flanking Amino Acid:

SSRGKSGPKETPDSAVNGPV

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.7

0.28

1.3

53.3

39.5

Major BPS

0.57

73.6

28.6

Major PPT

46.5

-0.2

1.7

51.8

40.6

Minor 5ss

-3

3.6

31.7

42.2

Minor BPS

53.3

0.18

1.9

74.84

42.2

Associated Gene:

Gene:

SMG5

Ensembl Gene ID:

ENSAPLG00000010263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010739

286118 - 305367

19250