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Intron Name: Anas_platyrhynchos_platyrhynchos_26_296720_297180_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

296720 - 297180

Intron Length:

461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGAGGG

5'SS Class:

major

3'SS Sequence:

GCAATCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCGCAA

U12 Branch Point Sequence:

TTCTTCGCAATC

Flanking Amino Acid:

ETRKLSPSKKRCKDIKRLLV

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

45.3

Major BPS

60.8

0.27

1.4

71.6

36.4

Major PPT

69.4

0.44

0.9

65.9

40.5

Minor 5ss

28.9

-2.4

3.5

38.1

46.8

Minor BPS

48.7

-0.1

2.2

65.51

Associated Gene:

Gene:

SMG5

Ensembl Gene ID:

ENSAPLG00000010263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010739

286118 - 305367

19250