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Intron Name: Anas_platyrhynchos_platyrhynchos_26_318665_318995_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

318665 - 318995

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACAGGC

5'SS Class:

major

3'SS Sequence:

TTGTTGTTTTGAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

AAAAAATTAACA

Flanking Amino Acid:

ESAYGTRYLDDLCVKILRED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.2

56.9

Major BPS

69.8

0.49

70.3

31.8

Major PPT

64.4

0.33

1.7

76.9

42.1

Minor 5ss

36.5

-1.5

3.4

47.6

43.3

Minor BPS

49.2

-0

1.8

59.88

38.5

Associated Gene:

Gene:

HORMAD1

Ensembl Gene ID:

ENSAPLG00000009738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044384

317828 - 327598

9771

ENSAPLT00000010150

318123 - 327598

9476