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Intron Name: Anas_platyrhynchos_platyrhynchos_26_319060_320708_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

319060 - 320708

Intron Length:

1649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTGATTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTATTTGATT

Flanking Amino Acid:

NCPGSTQLVKWMLGCYDALQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

32.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.5

0.8

80.7

36.7

Minor 5ss

38.2

-1.3

3.1

45.3

45.2

Minor BPS

0.55

1.5

79.36

37.3

Associated Gene:

Gene:

HORMAD1

Ensembl Gene ID:

ENSAPLG00000009738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044384

317828 - 327598

9771