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Intron Name: Anas_platyrhynchos_platyrhynchos_26_320746_320989_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

320746 - 320989

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTCCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTGCTTTAATT

Flanking Amino Acid:

GCYDALQKKYLRMIVLAVYT

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.3

81.8

38.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.5

67.2

38.7

Minor 5ss

41.5

-0.9

3.1

58.6

39.2

Minor BPS

80.1

1.02

1.2

91.31

32.6

Associated Gene:

Gene:

HORMAD1

Ensembl Gene ID:

ENSAPLG00000009738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044384

317828 - 327598

9771

ENSAPLT00000010150

318123 - 327598

9476