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Intron Name: Anas_platyrhynchos_platyrhynchos_26_321673_322884_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

321673 - 322884

Intron Length:

1212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTCC

5'SS Class:

major

3'SS Sequence:

TGTCCATTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

AAAAGCTGAACA

Flanking Amino Acid:

THNGPLLNFSSKSKGSDSPI

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

60.5

39.3

Major BPS

65.3

0.38

71.6

30.1

Major PPT

75.1

0.56

0.9

66.5

39.7

Minor 5ss

-1.5

3.4

51.5

45.2

Minor BPS

48.2

-0.1

1.9

58.21

40.4

Associated Gene:

Gene:

HORMAD1

Ensembl Gene ID:

ENSAPLG00000009738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044384

317828 - 327598

9771

ENSAPLT00000010150

318123 - 327598

9476