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Intron Name: Anas_platyrhynchos_platyrhynchos_26_323037_323354_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

323037 - 323354

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGTTT

5'SS Class:

major

3'SS Sequence:

TTCTTCCCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTGCAA

U12 Branch Point Sequence:

TCTTCCCTACAG

Flanking Amino Acid:

LTMKLFYYDEVTPPDYQPPG

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

72.3

39.7

Major BPS

46.8

-0.2

1.4

55.1

42.1

Major PPT

86.3

0.82

0.7

80.7

24.7

Minor 5ss

41.3

-1

3.7

64.1

47.4

Minor BPS

48.7

-0.2

2.1

61.25

46.2

Associated Gene:

Gene:

HORMAD1

Ensembl Gene ID:

ENSAPLG00000009738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044384

317828 - 327598

9771

ENSAPLT00000010150

318123 - 327598

9476