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Intron Name: Anas_platyrhynchos_platyrhynchos_26_325394_325885_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

325394 - 325885

Intron Length:

492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATCTTCTCATTT

Flanking Amino Acid:

NRSVYVSNRQVDHLASKTSE

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

76.6

33.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

80.1

0.68

0.8

78.1

Minor 5ss

37.7

-1.4

3.1

47.6

48.1

Minor BPS

0.11

1.8

69.81

41.8

Associated Gene:

Gene:

HORMAD1

Ensembl Gene ID:

ENSAPLG00000009738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044384

317828 - 327598

9771

ENSAPLT00000010150

318123 - 327598

9476