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Intron Name: Anas_platyrhynchos_platyrhynchos_26_325970_326526_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

325970 - 326526

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTTAGTATC

5'SS Class:

major

3'SS Sequence:

TTTCTCCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

CGACCTGTAACC

Flanking Amino Acid:

RSGKIFQTYIPEPSSSQDVL

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.4

40.4

Major BPS

62.2

0.3

1.2

38.7

Major PPT

86.8

0.83

0.7

24.3

Minor 5ss

38.2

-1.3

2.7

48.5

Minor BPS

48.1

-0.1

57.17

41.4

Associated Gene:

Gene:

HORMAD1

Ensembl Gene ID:

ENSAPLG00000009738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044384

317828 - 327598

9771

ENSAPLT00000010150

318123 - 327598

9476