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Intron Name: Anas_platyrhynchos_platyrhynchos_26_3687_4354_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
3687 - 4354

Intron Length:
668

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGCCCACC

5'SS Class:
major

3'SS Sequence:
CCTCTCTTGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTGAC

U12 Branch Point Sequence:
CTCTCCTGACCC

Flanking Amino Acid:
DVYCYAEDLPGEIFLETAPD

Intron Amino Acid Position:
92

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
62.2
0.29
1.2
56.9
42.5

Major BPS
68.9
0.47
1
59.2
39.1

Major PPT
75.3
0.57
0.9
72
32.5

Minor 5ss
39.7
-1.2
3
52.9
44

Minor BPS
56.5
0.18
1.8
66.78
44.8

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

51 - 4788
4738

51 - 4788
4738