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Intron Name: Anas_platyrhynchos_platyrhynchos_26_368933_369424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

368933 - 369424

Intron Length:

492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTCCA

5'SS Class:

major

3'SS Sequence:

TTTCTTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAA

U12 Branch Point Sequence:

TTTCTTTCCACA

Flanking Amino Acid:

ESPGMLTKLQIKQMMEAATR

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

1.3

71.6

40.2

Major BPS

53.6

0.09

59.9

32.5

Major PPT

87.8

0.85

0.6

83.8

24.5

Minor 5ss

29.9

-2.3

2.6

34.3

Minor BPS

-0

1.9

68.33

38.3

Associated Gene:

Gene:

PRPF3

Ensembl Gene ID:

ENSAPLG00000002440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040359

364294 - 372876

8583

ENSAPLT00000002508

360713 - 372843

12131