Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_418764_419538_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

418764 - 419538

Intron Length:

775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTACGTGGA

5'SS Class:

major

3'SS Sequence:

TCTTGTTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

ATTGATTTATTT

Flanking Amino Acid:

HYGTNGGNCGGVESSEEPVY

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

63.5

43.1

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

83.5

0.75

0.8

76.2

37.8

Minor 5ss

30.5

-2.2

3.3

31.8

42.5

Minor BPS

49.7

0.06

1.8

70.74

40.9

Associated Gene:

Gene:

OTUD7B

Ensembl Gene ID:

ENSAPLG00000004627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004773

406353 - 425508

19156

ENSAPLT00000026473

398054 - 425508

27455