Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_420905_421921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

420905 - 421921

Intron Length:

1017

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGTTGT

5'SS Class:

major

3'SS Sequence:

TTTCAAATTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

CTTGTTTCAAAT

Flanking Amino Acid:

KDDSDNVKLASVTLSLEAKL

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.3

69.7

43.7

Major BPS

77.3

0.68

81.5

Major PPT

74.8

0.56

0.9

71.7

Minor 5ss

35.9

-1.6

3.1

50.1

46.2

Minor BPS

49.4

0.03

1.7

68.37

Associated Gene:

Gene:

OTUD7B

Ensembl Gene ID:

ENSAPLG00000004627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026473

398054 - 425508

27455

ENSAPLT00000004773

406353 - 425508

19156