About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_430570_430988_R


Intron Information:

Intron Rank:
146571

Intron Class:
major

Intron Phase:

Intron Coordinates:
430570 - 430988

Intron Length:
419

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTAAATATG

5'SS Class:
major

3'SS Sequence:
CTCTCCTGTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAA

U12 Branch Point Sequence:
TGCTTCTAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.4
0.67
1
75.1
41.1

Major BPS
85.3
0.88
0.8
84.2
21.8

Major PPT
73
0.52
0.9
68.9
31.6

Minor 5ss
38.3
-1.3
2.9
42.6
44.4

Minor BPS
66.1
0.59
1.7
79.89
42.3

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

429560 - 432169
2610

429560 - 432169
2610