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Intron Name: Anas_platyrhynchos_platyrhynchos_26_436749_437136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

436749 - 437136

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATTTT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

AGACACCTGACT

Flanking Amino Acid:

DEQEVVAEVQEFYGDYIAVN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.8

86.3

23.9

Major BPS

60.1

0.25

35.6

Major PPT

71.2

0.48

67.6

37.8

Minor 5ss

-1.1

3.1

57.8

46.8

Minor BPS

46.6

-0.1

1.8

63.12

39.9

Associated Gene:

Gene:

VPS45

Ensembl Gene ID:

ENSAPLG00000002351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002414

435170 - 454770

19601