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Intron Name: Anas_platyrhynchos_platyrhynchos_26_438136_438713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

438136 - 438713

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATCAA

5'SS Class:

strong_major

3'SS Sequence:

CCATCCTTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

CTGTCCCCATCC

Flanking Amino Acid:

DDAITPLLNQWTYQAMVHEL

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

72.6

33.8

Major BPS

0.42

1.1

57.3

41.7

Major PPT

68.9

0.42

64.8

36.1

Minor 5ss

27.4

-2.6

2.8

31.6

42.6

Minor BPS

45.7

-0.3

2.1

59.24

45.6

Associated Gene:

Gene:

VPS45

Ensembl Gene ID:

ENSAPLG00000002351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002414

435170 - 454770

19601