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Intron Name: Anas_platyrhynchos_platyrhynchos_26_438849_439182_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

438849 - 439182

Intron Length:

334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

TTGTTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TTTCTCTCACAT

Flanking Amino Acid:

SAENDEFYANNMYLNFAEIG

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

72.2

35.9

Major BPS

72.7

0.56

30.1

Major PPT

83.6

0.76

0.8

78.1

30.7

Minor 5ss

36.4

-1.5

3.6

54.2

43.3

Minor BPS

49.6

0.05

1.9

74.8

41.6

Associated Gene:

Gene:

VPS45

Ensembl Gene ID:

ENSAPLG00000002351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002414

435170 - 454770

19601