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Intron Name: Anas_platyrhynchos_platyrhynchos_26_448967_454627_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

448967 - 454627

Intron Length:

5661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGGCC

5'SS Class:

major

3'SS Sequence:

CTTCTCTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CTCACCTGAACT

Flanking Amino Acid:

LGGTTIHNTKSFLEEVTAAG

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

68.8

Major BPS

72.7

0.56

30.1

Major PPT

79.1

0.66

0.9

76.4

32.2

Minor 5ss

-1.6

3.6

50.9

45.8

Minor BPS

65.6

0.57

1.6

77.64

44.4

Associated Gene:

Gene:

VPS45

Ensembl Gene ID:

ENSAPLG00000002351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002414

435170 - 454770

19601