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Intron Name: Anas_platyrhynchos_platyrhynchos_26_461916_468455_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

461916 - 468455

Intron Length:

6540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCTCG

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

TTTTGTTTTGCA

Flanking Amino Acid:

GDQLYISEKEVKDEKNVQEM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.1

63.3

43.9

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

42.8

-0.8

3.1

56.2

48.2

Minor BPS

40.5

-0.7

3.7

70.62

41.9

Associated Gene:

Gene:

PLEKHO1

Ensembl Gene ID:

ENSAPLG00000002526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002538

461057 - 471815

10759