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Intron Name: Anas_platyrhynchos_platyrhynchos_26_468597_469110_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

468597 - 469110

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACGCAAG

5'SS Class:

major

3'SS Sequence:

CCTTCTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

AGGCTCTGAGCT

Flanking Amino Acid:

LAHSRQPGNTAPNLIFLAVS

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

60.3

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

84.1

0.77

0.7

80.1

25.2

Minor 5ss

38.1

-1.3

3.1

48.7

47.2

Minor BPS

47.4

-0.1

1.7

61.59

41.8

Associated Gene:

Gene:

PLEKHO1

Ensembl Gene ID:

ENSAPLG00000002526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002538

461057 - 471815

10759