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Intron Name: Anas_platyrhynchos_platyrhynchos_26_469216_469963_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

469216 - 469963

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

GCCACCACTGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TTTGCCACCACT

Flanking Amino Acid:

TRAKNRILDEVTVEEDSYLA

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

72.4

0.56

73.5

32.5

Major PPT

59.4

0.21

0.9

51.4

32.5

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

47.8

-0

2.3

77.18

Associated Gene:

Gene:

PLEKHO1

Ensembl Gene ID:

ENSAPLG00000002526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002538

461057 - 471815

10759