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Intron Name: Anas_platyrhynchos_platyrhynchos_26_563866_564817_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

563866 - 564817

Intron Length:

952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCTT

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTTACTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

GTGCTGTTTACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.7

34.8

Major BPS

71.4

0.53

1.1

63.4

Major PPT

49.7

-0

1.7

61.6

43.7

Minor 5ss

40.2

-1.1

3.1

59.2

45.2

Minor BPS

45.8

-0.2

2.3

65.67

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025351

563764 - 571870

8107