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Intron Name: Anas_platyrhynchos_platyrhynchos_26_564900_566406_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

564900 - 566406

Intron Length:

1507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

GCTTAAACCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TTTTCTTTTACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

74.2

0.6

39.4

Major PPT

63.7

0.31

55.1

38.9

Minor 5ss

26.7

-2.7

3.3

38.5

46.6

Minor BPS

80.4

1.04

1.5

96.11

29.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025351

563764 - 571870

8107