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Intron Name: Anas_platyrhynchos_platyrhynchos_26_571017_571600_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

571017 - 571600

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTCTTTGGG

5'SS Class:

weak_major

3'SS Sequence:

AACCTCCTCCAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCAAAA

U12 Branch Point Sequence:

GGCCCCAAAACC

Flanking Amino Acid:

VCIRGKKFLGYHVPMVGLAD

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.3

0.01

1.4

43.4

44.1

Major BPS

47.3

-0.1

50.8

30.3

Major PPT

56.7

0.15

52.9

Minor 5ss

33.2

-1.9

32.5

42.1

Minor BPS

46.1

-0.3

1.9

54.69

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041259

565657 - 571663

6007

ENSAPLT00000040302

567208 - 571705

4498

ENSAPLT00000035531

564691 - 571705

7015