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Intron Name: Anas_platyrhynchos_platyrhynchos_26_571075_571340_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

571075 - 571340

Intron Length:

266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCATGCT

5'SS Class:

major

3'SS Sequence:

ATTCAAAAGAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

TTGTATAGAATT

Flanking Amino Acid:

GVELCMMAEPEQKPKRKNKN

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.4

0.29

1.3

63.2

41.5

Major BPS

74.2

0.6

0.9

75.7

Major PPT

47.4

-0.1

1.2

43.3

39.9

Minor 5ss

-2.4

3.3

42.3

44.4

Minor BPS

48.1

-0

1.9

70.71

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004591

567875 - 571393

3519