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Intron Name: Anas_platyrhynchos_platyrhynchos_26_657283_658879_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

657283 - 658879

Intron Length:

1597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

TCGTCCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTGAT

U12 Branch Point Sequence:

GTGTTCTTGTCG

Flanking Amino Acid:

VVAKYNLDVSDLPQLPTPHV

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

59.1

45.8

Major BPS

63.5

0.33

1.4

57.1

49.4

Major PPT

73.9

0.54

0.8

65.5

36.1

Minor 5ss

29.1

-2.4

3.5

38.2

46.7

Minor BPS

43.1

-0.6

3.5

58.36

43.8

Associated Gene:

Gene:

CADM3

Ensembl Gene ID:

ENSAPLG00000017996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040610

640680 - 660975

20296

ENSAPLT00000033576

640680 - 660975

20296