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Intron Name: Anas_platyrhynchos_platyrhynchos_26_660229_660554_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

660229 - 660554

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTAAG

5'SS Class:

major

3'SS Sequence:

CCCCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTGAC

U12 Branch Point Sequence:

TCCTCCGTGACG

Flanking Amino Acid:

SRQQSPAEVMCTYLTHEAKG

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

Major BPS

48.6

-0

1.2

40.4

Major PPT

69.6

0.44

0.8

60.5

29.4

Minor 5ss

31.6

-2.1

2.7

34.2

41.4

Minor BPS

53.9

-0

2.2

62.07

46.3

Associated Gene:

Gene:

CADM3

Ensembl Gene ID:

ENSAPLG00000017996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043460

640680 - 660975

20296

ENSAPLT00000033576

640680 - 660975

20296