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Intron Name: Anas_platyrhynchos_platyrhynchos_26_687611_687888_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

687611 - 687888

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

ATCTCCCTCACT

Flanking Amino Acid:

PLLTGLFAISRLIYWLSYAI

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

33.6

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

74.9

0.56

0.8

65.6

36.1

Minor 5ss

37.7

-1.4

3.3

53.4

43.8

Minor BPS

57.2

0.31

2.1

79.02

Associated Gene:

Gene:

TMEM79

Ensembl Gene ID:

ENSAPLG00000028836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036188

686436 - 688093

1658

ENSAPLT00000018470

686436 - 689016

2581