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Intron Name: Anas_platyrhynchos_platyrhynchos_26_691227_691359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

691227 - 691359

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGATCAT

U12 Branch Point Sequence:

GTCCCTCCAACC

Flanking Amino Acid:

SFSNGSLAFRVTAYETSGRD

Intron Amino Acid Position:

663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

71.6

40.2

Major BPS

55.3

0.13

1.4

59.7

46.7

Major PPT

79.7

0.67

0.8

74.3

30.1

Minor 5ss

39.2

-1.2

2.8

41.9

44.5

Minor BPS

46.7

-0.2

1.9

57.76

40.7

Associated Gene:

Gene:

CCT3

Ensembl Gene ID:

ENSAPLG00000009108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030880

689247 - 694484

5238

ENSAPLT00000009516

690146 - 699197

9052

ENSAPLT00000043765

689247 - 693164

3918

ENSAPLT00000035985

690146 - 699949

9804